And also I need the final output in Apple Pro Res 4:4:4 is it possible through nuke.
No can do on Windows. You can download a ProRes decoder which allows you to read ProRes files, but you can’t write ProRes on Windows.
Go openEXR or dpx.
can exr sequence be compiled back into a prores video?
Yes, but probably not on a Windows machine.
Does fcp handle exr sequence?
No.
Apart from that, FCP’s performance with file sequences is poor at best, so go the QuickTime route. Compressor allows you to read openEXR and encode into ProRes 4444.